PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921697.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 618aa MW: 67056.6 Da PI: 6.9879

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	344	402	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_023921697.1 344 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 402 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MAKGGGLSID LDPIGFFLHQ PIVLNSFPED NINSHNNFKC KLTAMDATLN NRSPPSTIQF 60 PVNLNCSNLH DSPPPSDDKR TVIDEMDFFA KKDHDNKAAP STDHADKKDD LDRPTTLEFN 120 VNTGLNLLTT NTSSDQSMVD DGISPNVEDK RAKSELVVKK AELERMKVEN QRLKEMLNQV 180 TTNYNALQMH LMTLMQAPKA ENGRVDEKVV EGKNNGGLIV PRQFMDLGLA ANGDTDENSV 240 SSSEGRSRER SGSPGNNGEL ASKKVRIIKD GISEERLVFD QENKKEYGRG DNGREESPVG 300 QTSQGWGPNK VARFNSPKNV DQTEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN 360 PCPRAYYRCT MAAGCPVRKQ VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAARM 420 LLSGSMSSAD GLMNSNFLTR TLLPCSSSMA TISASAPFPT VTLDLTQSPN PLQFQRPQNQ 480 FQIPFPNPTQ NFSNASPSLL PQIFGQELYN QSKFSGLQMS QDMDPAQLQA LPMNQGQQNS 540 SLSDTLSAAT AAIASDPNFT AALAAAITSI IGGGAHPNNN GNNNTSLTTT SNSNGNITTG 600 NSNSNGNNKI NNSSFQGN

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MAKGGGLSID LDPIGFFLHQ PIVLNSFPED NINSHNNFKC KLTAMDATLN NRSPPSTIQF  60
PVNLNCSNLH DSPPPSDDKR TVIDEMDFFA KKDHDNKAAP STDHADKKDD LDRPTTLEFN  120
VNTGLNLLTT NTSSDQSMVD DGISPNVEDK RAKSELVVKK AELERMKVEN QRLKEMLNQV  180
TTNYNALQMH LMTLMQAPKA ENGRVDEKVV EGKNNGGLIV PRQFMDLGLA ANGDTDENSV  240
SSSEGRSRER SGSPGNNGEL ASKKVRIIKD GISEERLVFD QENKKEYGRG DNGREESPVG  300
QTSQGWGPNK VARFNSPKNV DQTEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN  360
PCPRAYYRCT MAAGCPVRKQ VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAARM  420
LLSGSMSSAD GLMNSNFLTR TLLPCSSSMA TISASAPFPT VTLDLTQSPN PLQFQRPQNQ  480
FQIPFPNPTQ NFSNASPSLL PQIFGQELYN QSKFSGLQMS QDMDPAQLQA LPMNQGQQNS  540
SLSDTLSAAT AAIASDPNFT AALAAAITSI IGGGAHPNNN GNNNTSLTTT SNSNGNITTG  600
NSNSNGNNKI NNSSFQGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-112	WRKY family protein