PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023901203.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 714aa MW: 77195.9 Da PI: 7.8836

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023901203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.8e-30	319	377	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_023901203.1 319 NDGCQWRKYGQKMAKGNPCPRAYYRCTMGaSCPVRKQVQRCAEDRSILITTYEGNHNHP 377 8*************************98**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MAKGGGLTID PDSTSFFITN KPTVLNSYTE PNHTSRFKND IVDISTDPIR NSGDEDVPSP 60 ASANWKPVIV NEMDFFPTDR NSSKESHRVN VKKESAQDVV IRSLGLNTGL NLTTNTSSEK 120 SNEDDRTNNT SNKKSFNELI ALQAELDRMS VENERLKVLL SQVKDNYNSL QIHFATLMQH 180 QQARKAKTGI VDEVINGDKS NGGGLTRQFM DLHRVEKDEP SHTSSEGGLR DCSSSPMKDK 240 VELEYKKQKI CSSSSEIIQL DLDKSDSRNG TATISGSVLN KAPRFTTSRD ADHQNSETLS 300 MIRKARVSVR ARSDGTTIND GCQWRKYGQK MAKGNPCPRA YYRCTMGASC PVRKQVQRCA 360 EDRSILITTY EGNHNHPLPP AAMATASYTS AAASMLLSGS MPSSDALMNS NILARSALSS 420 SPSFATLSAS APFPTVTLDL TQPHNASQFQ RAVQGQYNMF SSSLPHFMSA PQVFGQALQN 480 QSKYVGLHSS QGIELPPFAS SNQIHTLNVQ RCAEDRSILI TTYEGNHNHP LPPAAMATAS 540 YTSAAASMLL SGSMPSSDAL MNSNILARSA LSSSPSFATL SASAPFPTVT LDLTQPHNAS 600 QFQRAVQGQY NMFSSSLPHF MSAPQVFGQA LQNQSKYVGL HSSQGIELPP FASSNQIHTP 660 SLSDAIGSAT AAITADPNFT AALVAAITSI IGNVHSNHSG NSTQPTTRNN NDNN

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MAKGGGLTID PDSTSFFITN KPTVLNSYTE PNHTSRFKND IVDISTDPIR NSGDEDVPSP  60
ASANWKPVIV NEMDFFPTDR NSSKESHRVN VKKESAQDVV IRSLGLNTGL NLTTNTSSEK  120
SNEDDRTNNT SNKKSFNELI ALQAELDRMS VENERLKVLL SQVKDNYNSL QIHFATLMQH  180
QQARKAKTGI VDEVINGDKS NGGGLTRQFM DLHRVEKDEP SHTSSEGGLR DCSSSPMKDK  240
VELEYKKQKI CSSSSEIIQL DLDKSDSRNG TATISGSVLN KAPRFTTSRD ADHQNSETLS  300
MIRKARVSVR ARSDGTTIND GCQWRKYGQK MAKGNPCPRA YYRCTMGASC PVRKQVQRCA  360
EDRSILITTY EGNHNHPLPP AAMATASYTS AAASMLLSGS MPSSDALMNS NILARSALSS  420
SPSFATLSAS APFPTVTLDL TQPHNASQFQ RAVQGQYNMF SSSLPHFMSA PQVFGQALQN  480
QSKYVGLHSS QGIELPPFAS SNQIHTLNVQ RCAEDRSILI TTYEGNHNHP LPPAAMATAS  540
YTSAAASMLL SGSMPSSDAL MNSNILARSA LSSSPSFATL SASAPFPTVT LDLTQPHNAS  600
QFQRAVQGQY NMFSSSLPHF MSAPQVFGQA LQNQSKYVGL HSSQGIELPP FASSNQIHTP  660
SLSDAIGSAT AAITADPNFT AALVAAITSI IGNVHSNHSG NSTQPTTRNN NDNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	2e-68	WRKY family protein