PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023897031.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 202aa MW: 23607.6 Da PI: 9.2153

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023897031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.4	3.2e-20	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_023897031.1 7 SRWCPTPEQLMILEEMYRSgIRTPNASQIQKITSHLsfygKIEGKNVFYWFQNHKARDRQ 66 7***************99***********************************996 PP
2	Wus_type_Homeobox	121	4.9e-39	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a++RW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_023897031.1 5 ASSRWCPTPEQLMILEEMYRSGIRTPNASQIQKITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67 689***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MSPAASSRWC PTPEQLMILE EMYRSGIRTP NASQIQKITS HLSFYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLSRQLQLQQ QQQQQQQQQQ LYYYQLNQQN HQFQGYLDYS TGSAILPQFP 120 YDISNSFLPQ GGGGVASTHV MNYTWKEDIP QRLETEKMYG HDWMMMETGP SSPPCARPLQ 180 TLELFPITAT NLKEEGTTSK QF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	7e-48	WOX family protein