PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893569.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 302aa MW: 34575.1 Da PI: 6.2613

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68	1.2e-21	122	182	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023893569.1 122 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKEITSELgqhgQISETNVYNWFQNRRARSKR 182 89***************99************************************97 PP
2	Wus_type_Homeobox	100.5	1.3e-32	121	184	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq XP_023893569.1 121 SRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELGQHGQISETNVYNWFQNRRARSKRKQ 184 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MTEFNMMEWE KQGHPHPHHH HHHQHQQHQQ QQQEREEQQN GNVGNNIEVN GNGNGGMLYV 60 KVMTDEQLET LRKQIALYAS ICEQLVEMHK NLTAQQDLAG VRLGNLYCDP LMTSAGHKIT 120 SRQRWTPTPV QLQILERIFD QGNGTPSKQK IKEITSELGQ HGQISETNVY NWFQNRRARS 180 KRKQQNSAPN NGESEVETEV DSPKDKKTKP EEFHSQQNSD PRAEDLCFQN PEISSDLHFL 240 DPQSSKAEAM FPSDDGLKPA RSLGQISFYD GLLSNPRNDH LTGKMEVPGN YGLYQHSEDY 300 GM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	184	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-98	WOX family protein