PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023873399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WOX | ||||||||
Protein Properties | Length: 247aa MW: 27724.8 Da PI: 8.4244 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.1 | 9.4e-21 | 19 | 78 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ Le+l+++ r+psa+++++++++l +++ ++V++WFqN++a++++ XP_023873399.1 19 SRWNPTKEQISMLESLYRQgIRTPSADQIQQITSRLrvygHIEGKNVFYWFQNHKARQRQ 78 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116.1 | 1.7e-37 | 17 | 80 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi +Le+ly++G+rtP++++iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqkq XP_023873399.1 17 VSSRWNPTKEQISMLESLYRQGIRTPSADQIQQITSRLRVYGHIEGKNVFYWFQNHKARQRQKQ 80 579***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEGDNNKDMG GASGAPVSSR WNPTKEQISM LESLYRQGIR TPSADQIQQI TSRLRVYGHI 60 EGKNVFYWFQ NHKARQRQKQ KQESMAYINR YFHTTPPLFS PPCPNVLGGP YYLPHNDVRF 120 YPQYQHSKVL LPSGIRGRPR TEKLEKPRAL DGAAYNSAHQ GYGMAMHIGN STSDITNNYS 180 HYGQETLPLF PLHPTGILQG KTGKSCIDSS AENSTTTTPS SSEIEEGSGN YQPFFDFFFG 240 QGSCESD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 2e-52 | WOX family protein |