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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023870627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 24152.1 Da PI: 10.1715 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 39.2 | 1.4e-12 | 100 | 122 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK vk+++fprs XP_023870627.1 100 LDDGYRWRKYGQKAVKNNKFPRS 122 59********************8 PP | |||||||
2 | WRKY | 51.9 | 1.5e-16 | 153 | 194 | 18 | 59 |
-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 18 sefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++sYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ XP_023870627.1 153 PGSSQSYYRCTHQGCNVKKQVQRLTKDEAIVVTTYEGMHSHP 194 56789************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MENYSTYFSS SSSTPPTSSL TLSMADSHAY NELQGLKSNG FLGLMSQMGV VPAVSNIDVP 60 QSRSFTVGSE TDVNSGKKKG EKKIRKPRYA FQTRSQVDIL DDGYRWRKYG QKAVKNNKFP 120 RSRTSSSSSK RIQEGMDEMV KGPRHTKCHT KRPGSSQSYY RCTHQGCNVK KQVQRLTKDE 180 AIVVTTYEGM HSHPIEKSTD NFEHILSQMQ IYTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 3e-51 | WRKY family protein |