PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459614.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 551aa MW: 63076.2 Da PI: 6.4775

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70.3	3.1e-22	222	275	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt eL ++F ++e+L G+ekA+Pk+ilelm+v+gL +++v+SHLQkYR XP_026459614.1 222 KTRIVWTDELNRKFDAVIEKL-GIEKAVPKKILELMNVPGLKRDNVASHLQKYRQ 275 68*****************.******************************6 PP
2	Response_reg	58.5	3.8e-20	47	156	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEE..EESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeeva..eaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedaleal 90 vl++dD+p +++ ++++l++ y +v+ + ++e +l +l++ + +D++l + m +mdGlellk++ +e ++p++++ ++++++ ++++l XP_026459614.1 47 VLVIDDDPEFLQHIEKLLKELLY-QVTtySQLQAETLLSTLQAARnkFDIVLSSLYMANMDGLELLKHMLAEM-EIPVVMMVsSKDDNNIVIKCL 139 89*******************.56503344566677777766688******************6665.4665555538999**** PP HTTESEEEESS--HHHH CS Response_reg 91 kaGakdflsKpfdpeel 107 Ga d+l Kp++++++ XP_026459614.1 140 TEGACDCLIKPIERKDI 156 **********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MSRGLEESSQ ETQPEVNRKE TEQHEVVKKE HPTNEGLPEK FPEGVRVLVI DDDPEFLQHI 60 EKLLKELLYQ VTTYSQLQAE TLLSTLQAAR NKFDIVLSSL YMANMDGLEL LKHMLAEMEI 120 PVVMMVSSKD DNNIVIKCLT EGACDCLIKP IERKDIELIF KHVIIRKMRV EHSCECECHQ 180 KSTETSDFGV ALGNSKSLRR KRKNGEEIDK VVDTGGMSMA KKTRIVWTDE LNRKFDAVIE 240 KLGIEKAVPK KILELMNVPG LKRDNVASHL QKYRQSYKNS QGYPACNLNT SMNQPESHLA 300 PLLHSGGLIQ YSNKFQNHSM QDGQLGRPTH NTIDPLLSNG RFRPDHSKFV TKTGYIPHQS 360 QMRDHYQSQM RDHYINSLPG LMEQKMFLNG QDHNARAAHN RRNQPYSGGD LKTNYMTAEF 420 LPNYHSIDST LNLPNFPTNN MIHHEQSFQG SIDENCMKWK QQPPCASSDL DASNSIYPPP 480 VTDRYSLLNS QKNNHGHSDN LMRSQNNHHF ETLAGAQLLK PPQMEGMEPQ TETKFEDDEM 540 KFEDDDTKSE D

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MSRGLEESSQ ETQPEVNRKE TEQHEVVKKE HPTNEGLPEK FPEGVRVLVI DDDPEFLQHI  60
EKLLKELLYQ VTTYSQLQAE TLLSTLQAAR NKFDIVLSSL YMANMDGLEL LKHMLAEMEI  120
PVVMMVSSKD DNNIVIKCLT EGACDCLIKP IERKDIELIF KHVIIRKMRV EHSCECECHQ  180
KSTETSDFGV ALGNSKSLRR KRKNGEEIDK VVDTGGMSMA KKTRIVWTDE LNRKFDAVIE  240
KLGIEKAVPK KILELMNVPG LKRDNVASHL QKYRQSYKNS QGYPACNLNT SMNQPESHLA  300
PLLHSGGLIQ YSNKFQNHSM QDGQLGRPTH NTIDPLLSNG RFRPDHSKFV TKTGYIPHQS  360
QMRDHYQSQM RDHYINSLPG LMEQKMFLNG QDHNARAAHN RRNQPYSGGD LKTNYMTAEF  420
LPNYHSIDST LNLPNFPTNN MIHHEQSFQG SIDENCMKWK QQPPCASSDL DASNSIYPPP  480
VTDRYSLLNS QKNNHGHSDN LMRSQNNHHF ETLAGAQLLK PPQMEGMEPQ TETKFEDDEM  540
KFEDDDTKSE D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	5e-57	ARR-B family protein