PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026455347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 175aa MW: 20127.9 Da PI: 10.1928 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.2 | 2.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kR+ng+lKKA E+S+LCda+v+v++fs+ g++ eyss XP_026455347.1 9 KRIENSTNRQVTFAKRKNGLLKKAREISILCDADVSVVMFSEAGNMTEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 66 | 1.3e-22 | 69 | 162 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk sgk l++ak+e+l+ e+++++ke++nLq e+Rhl+GedL++Ls +eL+ Le++Le++ R+k +e + ++l+k + l+eenk+L+ XP_026455347.1 69 YQKESGKTLWDAKHERLSAEIDRVRKENSNLQIELRHLKGEDLKPLSPQELHALENALEDGYAGARAKIKE----HHRKLKKNGRLLEEENKRLS 159 8999***************************************************************9666....56667777777777777776 PP K-box 96 kkl 98 + + XP_026455347.1 160 ATY 162 654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MGRGKTELKR IENSTNRQVT FAKRKNGLLK KAREISILCD ADVSVVMFSE AGNMTEYSSA 60 PLIEQLARYQ KESGKTLWDA KHERLSAEID RVRKENSNLQ IELRHLKGED LKPLSPQELH 120 ALENALEDGY AGARAKIKEH HRKLKKNGRL LEEENKRLSA TYQQQQQNKW NMGAM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-56 | MIKC_MADS family protein |