PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455346.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 232aa    MW: 26499.1 Da    PI: 9.8682
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.2e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqvt+skR+ngilKKA E+ vLCda+v+++ifsstgk+ ey+s
  XP_026455346.1  9 KRIENSTNRQVTYSKRKNGILKKAREITVLCDADVSLVIFSSTGKMNEYCS 59
                    79***********************************************96 PP
2K-box79.96e-2769163199
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+sg++l++ak+e+l+ e++++kke++n+q e+Rhl+GedL++L+ +eL  +e +Le++l  +++k    ++e+ + l+kk ++l+eenk+L 
  XP_026455346.1  69 YQKASGNKLWDAKHEYLSAEVDRVKKENDNMQIELRHLKGEDLTPLNPRELIPIEAALEDGLVGVKAK----IKEHRRALKKKTRMLEEENKRLI 159
                     899***************************************************************99....6678999***************9 PP

           K-box  96 kkle 99 
                     +kl+
  XP_026455346.1 160 AKLQ 163
                     9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGRGKIEIKR IENSTNRQVT YSKRKNGILK KAREITVLCD ADVSLVIFSS TGKMNEYCSS  60
PLIKQLDRYQ KASGNKLWDA KHEYLSAEVD RVKKENDNMQ IELRHLKGED LTPLNPRELI  120
PIEAALEDGL VGVKAKIKEH RRALKKKTRM LEEENKRLIA KLQQVEIHGR GEMDTGANNG  180
YNNQKAADGT RDYPSHNDNH HQVPFAFQMQ PIQSNLTTAT TTTNNNKYQL LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-64MIKC_MADS family protein