PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026452474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WOX | ||||||||
Protein Properties | Length: 289aa MW: 33020.8 Da PI: 5.8488 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.6 | 2.8e-20 | 110 | 170 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps++++++++++l ++ e++V++WFqNrRa+ k+ XP_026452474.1 110 RQRWTPTPIQLQILERIFEQgNGTPSKQKIKDITSELtqhgQIVETNVYNWFQNRRARSKR 170 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 98.4 | 5.6e-32 | 109 | 172 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i ++NV++WFQNr+aR+++kq XP_026452474.1 109 TRQRWTPTPIQLQILERIFEQGNGTPSKQKIKDITSELTQHGQIVETNVYNWFQNRRARSKRKQ 172 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MMGIMRNGDG EEEYMRRIME WDKPPGAAKQ EQQQQVQEEE NNGGVIYVKV MTDEQIEDLR 60 KQISVYASIC EQLVQMHKAI TAQQDLSGMR LGNLYCDPMM TSGSHKITTR QRWTPTPIQL 120 QILERIFEQG NGTPSKQKIK DITSELTQHG QIVETNVYNW FQNRRARSKR KQLGNAPNNA 180 ESEVETEVES PEEKKAKSDR TFTHENSSMR RVEEGCFHNS DLHSLDPHSN KAADSVFPSD 240 SGSKSSGSLG HVSFYENVLS NPRIDQLMGK MEMPGNYSPY RHGENYDLM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 172 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-73 | WOX family protein |