PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026451327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WOX | ||||||||
Protein Properties | Length: 247aa MW: 27838.1 Da PI: 9.292 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.8e-18 | 5 | 64 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le ++ +psa+e++++++kl +++ ++V++WFqN++a++++ XP_026451327.1 5 SRWNPTKEQIDMLEGIYKAgITTPSAAEIQHMTSKLrmygDIEGKNVFYWFQNHKARQRQ 64 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 106.9 | 1.3e-34 | 4 | 66 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le +yk+G+ tP+++eiq++t++L+ yG ie+kNVfyWFQN+kaR+rq+q XP_026451327.1 4 HSRWNPTKEQIDMLEGIYKAGITTPSAAEIQHMTSKLRMYGDIEGKNVFYWFQNHKARQRQRQ 66 68***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MCNHSRWNPT KEQIDMLEGI YKAGITTPSA AEIQHMTSKL RMYGDIEGKN VFYWFQNHKA 60 RQRQRQVRHS YGSGYHDPRI HFKHQLLHNQ ISSSMGLAPP NTNGFLCSKF SPYCAPAGPS 120 FIPPYAHQHQ NPKVLLPPRS TVIARSASNI VNTRPADSQT LDYAVGNAEN HYHETLPLFP 180 IHPTGIRKSE DKEKDYSGFK NASLTTISLC TASTNRREDD ADADANANAN AAQKENGRRF 240 LDFFATH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 2e-29 | WOX family protein |