PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026445833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26526 Da PI: 9.6271 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.1 | 1.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skR+ngilKKA E+ vLCda+v+++ifsstgk+ ey+s XP_026445833.1 9 KRIENSTNRQVTYSKRKNGILKKAREITVLCDADVSLVIFSSTGKMNEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.9 | 2.6e-26 | 69 | 163 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+sg++l++ak+e+l+ e++++kke++n+q e+Rhl+GedL++L+ +eL +e +Le++l +++k ++e+ + l kk ++l+eenk+L XP_026445833.1 69 YQKASGNKLWDAKHEYLSAEVDRVKKENDNMQIELRHLKGEDLTPLNPRELIPIEAALEDGLVGVKAK----IKEHRRALEKKTRMLEEENKRLI 159 899***************************************************************99....5678999***************9 PP K-box 96 kkle 99 +kl+ XP_026445833.1 160 AKLQ 163 9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKIEIKR IENSTNRQVT YSKRKNGILK KAREITVLCD ADVSLVIFSS TGKMNEYCSS 60 PLIKQLDRYQ KASGNKLWDA KHEYLSAEVD RVKKENDNMQ IELRHLKGED LTPLNPRELI 120 PIEAALEDGL VGVKAKIKEH RRALEKKTRM LEEENKRLIA KLQQVEIHGR GEMDTGANNG 180 YNNQKAADGT RDYPSHNDNH HQVPFAFQMQ PIQSNLTTAT TNNNNNKYQL LD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 5e-64 | MIKC_MADS family protein |