PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24847.3 Da PI: 10.1245 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.3 | 2.6e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien nrq+t+skR+ gilKKA EL +LC+a+v++i+fs++gk+ ey+s XP_026443089.1 9 KFIENPFNRQITYSKRKSGILKKARELTILCNAQVCLIMFSKSGKIAEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 57.8 | 4.8e-20 | 71 | 167 | 1 | 96 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllG.edLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 yq++++++l+ea++e lq+el+ ++ + L++e+R++ G ++L++Ls++eL+ Le++L++sl +R++Kn++l++q++++ k + + + L XP_026443089.1 71 YQRKTNTDLWEAQYEALQKELRAQQEIGSRLKKEIRQRTGgDGLSELSFEELRVLEEDLHHSLGIVRNRKNHVLTSQTRTTMKSIRIEETRRSIL 165 78899999*****************************985378***********************************99977766666666666 PP K-box 95 rk 96 ++ XP_026443089.1 166 QR 167 55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MGRGKIEIKF IENPFNRQIT YSKRKSGILK KARELTILCN AQVCLIMFSK SGKIAEYISP 60 STTLKDFLDR YQRKTNTDLW EAQYEALQKE LRAQQEIGSR LKKEIRQRTG GDGLSELSFE 120 ELRVLEEDLH HSLGIVRNRK NHVLTSQTRT TMKSIRIEET RRSILQRSLC AEREKQESHL 180 IAVPAGNDGD DQPHFTTLQM FTNWFSTATK PSQSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 4e-47 | MIKC_MADS family protein |