PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 270aa MW: 31248 Da PI: 6.3847 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.2 | 5.7e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k ien+ rq ++skRr gi KKA EL vLCda+v+v++fsstgkl+ey XP_026443088.1 9 KYIENSAYRQASYSKRRSGITKKATELTVLCDAQVCVVMFSSTGKLHEYV 58 579**********************************************7 PP | |||||||
2 | K-box | 54.1 | 6.7e-19 | 71 | 168 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 yq+ + ++l++a++e lq+el+ ++ + L++e+ ++ G+ dL++Ls++eL+ Le++L++slk iR++K+++l++ ++ +k ++l+e+ k+L XP_026443088.1 71 YQRETRVDLWAAEQEALQEELRAQQEIGRRLKKEISQRTGQdDLSELSIEELRGLEENLDESLKIIRKRKDHVLTSRTNIFTRKIRNLEEARKRL 165 67788889********************************637**************************************************99 PP K-box 95 rkk 97 + XP_026443088.1 166 LRS 168 876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MGRAKIEIKY IENSAYRQAS YSKRRSGITK KATELTVLCD AQVCVVMFSS TGKLHEYVSP 60 STTLKEFFDR YQRETRVDLW AAEQEALQEE LRAQQEIGRR LKKEISQRTG QDDLSELSIE 120 ELRGLEENLD ESLKIIRKRK DHVLTSRTNI FTRKIRNLEE ARKRLLRSVY AKKEEPYYPV 180 PADNEGDHYP EYVQKQEQEF FSVVPANNER DQQSKYGSAS LSVGRDFIND RAGDFESSEI 240 AFHQLQPSHT NLNDEAGGVC QSSYMSMILL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 4e-46 | MIKC_MADS family protein |