PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026440733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 163aa MW: 18948.6 Da PI: 9.7866 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.5 | 1.8e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC++eva+++fss+gkl+e+ss XP_026440733.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEVEVALLVFSSRGKLFEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 63.6 | 7.5e-22 | 83 | 162 | 5 | 84 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 ++k+ e++++++lq e+a+L k+ienL+ ++R+l+GedLes+s+ eL+ e+qLeksl +iR+k n+l +e+i++ +k XP_026440733.1 83 NNKAIEQQNSQQLQYEVANLAKKIENLEASKRKLMGEDLESCSIDELETAENQLEKSLLNIREKMNQLQRENIKQVEQKV 162 4555899*******************************************************************999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE VEVALLVFSS RGKLFEFSSS 60 STSVQKMIQR YQKYYKDGNY GNNNKAIEQQ NSQQLQYEVA NLAKKIENLE ASKRKLMGED 120 LESCSIDELE TAENQLEKSL LNIREKMNQL QRENIKQVEQ KVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-57 | MIKC_MADS family protein |