PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026440732.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 27032 Da PI: 10.2478 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.1 | 6.6e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrngilKKA+ELSvLC+ae+a+iifs+tgkl+e+ss XP_026440732.1 10 RIENATSRQVTFSKRRNGILKKAYELSVLCEAEIALIIFSPTGKLHEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 72.4 | 1.3e-24 | 101 | 183 | 16 | 98 |
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +l++e+a+L k+ie+L+ ++R+l+Ge+Les+s++eLq e+qLeksl iR++K++l +++ie+l++kek+l een+ Lr++l XP_026440732.1 101 HLKHEAANLAKKIESLEVSKRKLMGEGLESCSINELQTTENQLEKSLLIIRERKHQLHRKKIEQLKQKEKQLLEENEVLRERL 183 789****************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKTEMRR IENATSRQVT FSKRRNGILK KAYELSVLCE AEIALIIFSP TGKLHEFSSS 60 STSMQNTIER YQKHDADVKE NSQVRQPLQL YHDVLSNILC HLKHEAANLA KKIESLEVSK 120 RKLMGEGLES CSINELQTTE NQLEKSLLII RERKHQLHRK KIEQLKQKEK QLLEENEVLR 180 ERLSLTVRED VGLDNGINRT NRKKYKTLLP YETSQNSRVV KTELQIGRPE RR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-59 | MIKC_MADS family protein |