PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026440402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 203aa MW: 23883 Da PI: 8.0201 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.5 | 4.7e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien++ rqvtfskRrng+lKKA+ELSvLCdae+a+i+fsstgklye+ss XP_026440402.1 10 KIENTTSRQVTFSKRRNGLLKKASELSVLCDAEIALIVFSSTGKLYEFSS 59 69**********************************************96 PP | |||||||
2 | K-box | 71 | 3.7e-24 | 67 | 152 | 6 | 91 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 ++ ++ + e+l+ e+a+L keienLq++qR+l+Ge+Les+s+ eLq e+qLe sl +iR+kKn+l++eqie+l+++ qee+ XP_026440402.1 67 IERYQKYNKEQLKYEAANLAKEIENLQTSQRKLMGESLESCSVDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEEQ 152 44577889999******************************************************************988887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGRGKTVMRK IENTTSRQVT FSKRRNGLLK KASELSVLCD AEIALIVFSS TGKLYEFSST 60 TSMQKTIERY QKYNKEQLKY EAANLAKEIE NLQTSQRKLM GESLESCSVD ELQTAETQLE 120 MSLLNIRTKK NQLYREQIEQ LKQQHMTFQE EQLLEENEVL WEKCRSRQWE QQNQQTEMAL 180 PYETSPNSQE VETKLQIGRP ERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-58 | MIKC_MADS family protein |