PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026440401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23924 Da PI: 6.7428 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.5 | 4.7e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien++ rqvtfskRrng+lKKA+ELSvLCdae+a+i+fsstgklye+ss XP_026440401.1 10 KIENTTSRQVTFSKRRNGLLKKASELSVLCDAEIALIVFSSTGKLYEFSS 59 69**********************************************96 PP | |||||||
2 | K-box | 78.9 | 1.3e-26 | 76 | 165 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++++l+ e+a+L keienLq++qR+l+Ge+Les+s+ eLq e+qLe sl +iR+kKn+l++eqie+l+++e++l een+ L +k XP_026440401.1 76 EVQENSQQLKYEAANLAKEIENLQTSQRKLMGESLESCSVDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQEEQLLEENEVLWEKC 165 34667899******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGRGKTVMRK IENTTSRQVT FSKRRNGLLK KASELSVLCD AEIALIVFSS TGKLYEFSST 60 TSMQKTIERY QKYNKEVQEN SQQLKYEAAN LAKEIENLQT SQRKLMGESL ESCSVDELQT 120 AETQLEMSLL NIRTKKNQLY REQIEQLKQQ EEQLLEENEV LWEKCRSRQW EQQNQQTEMA 180 LPYETSPNSQ EVETKLQIGR PERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11880.1 | 4e-58 | MIKC_MADS family protein |