PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440399.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 209aa    MW: 24568.7 Da    PI: 7.1965
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.54.9e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +ien++ rqvtfskRrng+lKKA+ELSvLCdae+a+i+fsstgklye+ss
  XP_026440399.1 10 KIENTTSRQVTFSKRRNGLLKKASELSVLCDAEIALIVFSSTGKLYEFSS 59
                    69**********************************************96 PP

2K-box713.5e-2475158891
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                     +  ++++++l+ e+a+L keienLq++qR+l+Ge+Les+s+ eLq  e+qLe sl +iR+kKn+l++eqie+l+++    qee+
  XP_026440399.1  75 KEVQENSQQLKYEAANLAKEIENLQTSQRKLMGESLESCSVDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEEQ 158
                     334667899******************************************************************988887765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGRGKTVMRK IENTTSRQVT FSKRRNGLLK KASELSVLCD AEIALIVFSS TGKLYEFSST  60
TSMQKTIERY QKYNKEVQEN SQQLKYEAAN LAKEIENLQT SQRKLMGESL ESCSVDELQT  120
AETQLEMSLL NIRTKKNQLY REQIEQLKQQ HMTFQEEQLL EENEVLWEKC RSRQWEQQNQ  180
QTEMALPYET SPNSQEVETK LQIGRPERR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-61MIKC_MADS family protein