PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026436640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 473aa MW: 54041.4 Da PI: 6.6387 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 54.1 | 3.5e-17 | 212 | 277 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse...........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt eL ++F ++e+LG + +A+Pk+il+lm+v+gL +ehv+SHLQkYR XP_026436640.1 212 KTRIVWTDELNRKFDAVIEKLGIEStiltlylsyfcNAVPKKILQLMNVPGLKREHVASHLQKYRQ 277 68*******************6443444444555557****************************6 PP | |||||||
2 | Myb_DNA-binding | 24 | 9.4e-08 | 216 | 276 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..............tWktIartmg.kgRtlkqcksrwqkyl 48 WT e+ ++ ++++lG + +k+I + m+ g+ ++++ s++qky+ XP_026436640.1 216 VWTDELNRKFDAVIEKLGIEstiltlylsyfcnaVPKKILQLMNvPGLKREHVASHLQKYR 276 6***********************************************************7 PP | |||||||
3 | Response_reg | 56.6 | 1.5e-19 | 38 | 147 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEES..SHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaead..dgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+ dD+p +++ ++++l++ y +v++ + ++e +l +l++ + +D++l + m +mdGlellk++ +e + + +++++++++++ ++++l XP_026436640.1 38 VLVTDDDPEFLQHIEKLLKELLY-QVTTYSklQAENVLSTLQAARnkFDIVLSSVHMANMDGLELLKHMLAEMDIPVVMMMSSEDDNNIVIKCLT 131 8999*******************.66554411577788888777788**********************76663445555668889********* PP TTESEEEESS--HHHH CS Response_reg 92 aGakdflsKpfdpeel 107 Ga d+l Kp++++++ XP_026436640.1 132 EGACDCLIKPIERKDI 147 ***********99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MSRGLEESSQ ETQQHEVVKK ENPTNEGLPE KFPEGVRVLV TDDDPEFLQH IEKLLKELLY 60 QVTTYSKLQA ENVLSTLQAA RNKFDIVLSS VHMANMDGLE LLKHMLAEMD IPVVMMMSSE 120 DDNNIVIKCL TEGACDCLIK PIERKDIELI FKHVIIRKMR VEHSCECECH HKSPETSDFG 180 VALGNSKSLR KRKNGEAIDK DVDTSGMSMA KKTRIVWTDE LNRKFDAVIE KLGIESTILT 240 LYLSYFCNAV PKKILQLMNV PGLKREHVAS HLQKYRQSYR KSQGYPACNL NTPMNQPESH 300 LAPLLHGGIQ YSNKFQNHGM QDGQLGRPTR TIDPSLLSNG RFGPDYSEFV TKAGYIPHQS 360 QMRDHYMNNL PGLMEQQLFL NGQDYNAIET FNRRNQPYSG GDLKTNYMTA EFLPSYHSID 420 STLNLPNFPT NNMIHHEQSF QGSIDENCMK WRQQPPYAGS DLDTRTVYTP LQH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 187 | 193 | KSLRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-57 | ARR-B family protein |