PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026430339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 26349.2 Da PI: 8.4367 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.9 | 3.1e-29 | 30 | 79 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s XP_026430339.1 30 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 79 8***********************************************96 PP | |||||||
2 | K-box | 67.7 | 3.9e-23 | 87 | 172 | 6 | 91 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 ++ ++ + e+l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq e+qLe sl +iR+kKn+l++eqie+l+++ qe++ XP_026430339.1 87 IERYQKYNKEQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEDQ 172 45577889999******************************************************************988888764 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MKQHISFFRI SIFFGGETTI MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD 60 GEIALIVFSS TGKLYEFCST TSMQKTIERY QKYNKEQLKY EAVNLAKEIE NLQTSQRKLM 120 GESLESCSLD ELQTAETQLE MSLLNIRTKK NQLYREQIEQ LKQQHMTFQE DQLLEENEVL 180 WEKRSGITHF YVENKSLELR NIMIQRSMYL IDYNFDDVLA AKPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-58 | MIKC_MADS family protein |