PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026430338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 26390.2 Da PI: 8.0392 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.9 | 3.1e-29 | 30 | 79 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s XP_026430338.1 30 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 79 8***********************************************96 PP | |||||||
2 | K-box | 75.7 | 1.2e-25 | 95 | 184 | 8 | 97 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + ++++++l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq e+qLe sl +iR+kKn+l++eqie+l+++e++l een+ L +k XP_026430338.1 95 KEVQENSQQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQEDQLLEENEVLWEK 184 334667899****************************************************************************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MKQHISFFRI SIFFGGETTI MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD 60 GEIALIVFSS TGKLYEFCST TSMQKTIERY QKYNKEVQEN SQQLKYEAVN LAKEIENLQT 120 SQRKLMGESL ESCSLDELQT AETQLEMSLL NIRTKKNQLY REQIEQLKQQ EDQLLEENEV 180 LWEKRSGITH FYVENKSLEL RNIMIQRSMY LIDYNFDDVL AAKPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11880.1 | 1e-55 | MIKC_MADS family protein |