PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026428796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 180aa MW: 20417.3 Da PI: 10.1399 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.3 | 4.5e-22 | 12 | 106 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY++Y+++ GF +rk++s+ ++r +it+ fvC +eg ++++ ++ ek+++ ++ rtgC+a+l++ +++ ++w+v++++ +HnH+++p XP_026428796.1 12 FYRAYGRSRGFITRKRSSYATRRGPQITRVIFVCCCEGLHKKHVDSndddGEKKKNGASTMRTGCEAMLRIALNTkCNTWYVNEFKDHHNHDMVP 106 9*************************************99998877777677777888899*************989**************9975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MEIHSIEEAG AFYRAYGRSR GFITRKRSSY ATRRGPQITR VIFVCCCEGL HKKHVDSNDD 60 DGEKKKNGAS TMRTGCEAML RIALNTKCNT WYVNEFKDHH NHDMVPPRKQ VFMKSNKVFP 120 PATTNLAEAS SKHTTKQKAF RDGQKNVPTT GKPPQKDIRD VCCCVPRSTV TNTIRDGFSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80010.1 | 2e-12 | FAR1 family protein |