PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026428098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 150aa MW: 17368.1 Da PI: 8.4797 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.3 | 7.5e-27 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien+ nrqvt++kRr gi+KKA+ L +LCda+v+vi+fs+tgkl+ y XP_026428098.1 9 KFIENTPNRQVTYCKRRSGIMKKANDLTILCDAQVCVIMFSNTGKLHVYV 58 79*********************************************996 PP | |||||||
2 | K-box | 38.5 | 4.9e-14 | 71 | 146 | 1 | 75 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellle 75 yq+ + ++ +ea+ e l++el+ ++ + L++e+R++ G+ dL++ s++eL Le++L + lk R++K +++ + XP_026428098.1 71 YQRETCTDIWEAELEALEEELKTQQEIGSRLKKEIRQRTGQdDLSEFSIEELGGLEKDLARCLKILRERKVNVMSS 146 78888999********************************637******************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MGRAKIEIKF IENTPNRQVT YCKRRSGIMK KANDLTILCD AQVCVIMFSN TGKLHVYVSP 60 SNTLKKFFDR YQRETCTDIW EAELEALEEE LKTQQEIGSR LKKEIRQRTG QDDLSEFSIE 120 ELGGLEKDLA RCLKILRERK VNVMSSAMLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 5e-38 | MIKC_MADS family protein |