PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026427157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 274aa MW: 31071.3 Da PI: 8.8633 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaeva+iifsstgkl+e+ss XP_026427157.1 9 KRIENATSRQVTFSKRRAGLLKKAQELSVLCDAEVALIIFSSTGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 59.5 | 1.4e-20 | 76 | 173 | 4 | 100 |
K-box 4 ssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+++s +e + + ++e++ Lk+ei++L+ ++ ++lG++L L lkeLq+Le+qL++++ ++++K++ll++++++++ +e+++ en+ Lrk+ XP_026427157.1 76 SETTSlVEYDPERQQSKEISILKDEISKLRMTHLRMLGKELMGLGLKELQHLEDQLNEGMLLVKARKDNLLYDELDQSRLQEERAVMENRILRKQ 170 45555445555567789****************************************************************************** PP K-box 98 lee 100 +ee XP_026427157.1 171 VEE 173 987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGRGKIEIKR IENATSRQVT FSKRRAGLLK KAQELSVLCD AEVALIIFSS TGKLFEFSSS 60 GMKRTLSRYN KCQDNSETTS LVEYDPERQQ SKEISILKDE ISKLRMTHLR MLGKELMGLG 120 LKELQHLEDQ LNEGMLLVKA RKDNLLYDEL DQSRLQEERA VMENRILRKQ VEELQALVPS 180 TERTRPPYLE FHSMDRKPSS HTKHGLLSPK GVCHCSSEKR SSERHDDSDT SLHLGLAPDG 240 YYKKKAAERA SAERVSAERA SSSSNDSDTP MALS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 2e-65 | MIKC_MADS family protein |