PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026424550.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family WOX
Protein Properties Length: 300aa    MW: 33372 Da    PI: 6.6451
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026424550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.84.9e-202785457
                    -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    R+++tkeq+  Le l+ +  r+psae+++e+++kl    +++ ++V++WFqN++a++++
  XP_026424550.1 27 RWNPTKEQISLLEGLYSQgIRTPSAEQIQEITSKLkvygHIEGKNVFYWFQNHKARQRQ 85
                    9****************99**************************************96 PP
2Wus_type_Homeobox111.73.9e-362687465
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                        RW+Pt+eQi +Le ly++G+rtP++e+iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqkq
     XP_026424550.1 26 CRWNPTKEQISLLEGLYSQGIRTPSAEQIQEITSKLKVYGHIEGKNVFYWFQNHKARQRQKQ 87
                       6***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEDDKSIISS SVFDGTVTGG GSTGGCRWNP TKEQISLLEG LYSQGIRTPS AEQIQEITSK  60
LKVYGHIEGK NVFYWFQNHK ARQRQKQKQE QDLDNNIFYY NQFLLHHKSP PRLSPPLFAP  120
PPCNNNGLAS AFFIPPLPIP PPQQTFSTPV NSAYYQYPNT KVVVVPPGEV AMRRHVQADD  180
LSSGSTAGYK PVQYRLDGTT MLHAVGGDIV NKSWKEVLGD HTTLDLFPMH PTGILDEKFN  240
YSSTSGNSFS NNTGENNTSS SINSSSDQSC TEEGTTTSLG LHQPFFDFFA DHHYHPRCSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.11e-28WOX family protein