PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424314.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 385aa MW: 44121.6 Da PI: 8.6131

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2.1e-05	216	235	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_026424314.1 216 FSCSVCNKTFNRYNNMQMHM 235 89*****************9 PP
2	zf-C2H2	15.8	3.9e-05	300	322	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +CgksF + + ++H +++ XP_026424314.1 300 FMCRKCGKSFAVRGDWRTHEKNC 322 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MDYCFHQTTA PTFIEWLKPS PSISSPCKSS SSSSSSMVTN YQRQQQQEPH DEDRQEKESI 60 HRRYRQEGGS ICLPLLSRFT DDINKQPKEE ESSISLCRQK DGEHNTRVDV KEEKLLGNHD 120 KNNVTVALHI GLPKVGDSMQ LNNSHVQMMH VKQSLASYNG DKEDKPMSDR MMISFDQSCG 180 NLSNNSTGST TTNDQPQISR FWIPTPAQIL IGPTRFSCSV CNKTFNRYNN MQMHMWGHGS 240 QYRKGPESLR GVQPTAMLRL PCYCCAHGCK NNINHPRAKP LKDFRTLQTH YKRKHGVKPF 300 MCRKCGKSFA VRGDWRTHEK NCGKLWYCTC GSDFKHKRSL KDHIRSFGKG HFPHPCHKDF 360 EDCDQKETVD MESDDDELRS AGGSH

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MDYCFHQTTA PTFIEWLKPS PSISSPCKSS SSSSSSMVTN YQRQQQQEPH DEDRQEKESI  60
HRRYRQEGGS ICLPLLSRFT DDINKQPKEE ESSISLCRQK DGEHNTRVDV KEEKLLGNHD  120
KNNVTVALHI GLPKVGDSMQ LNNSHVQMMH VKQSLASYNG DKEDKPMSDR MMISFDQSCG  180
NLSNNSTGST TTNDQPQISR FWIPTPAQIL IGPTRFSCSV CNKTFNRYNN MQMHMWGHGS  240
QYRKGPESLR GVQPTAMLRL PCYCCAHGCK NNINHPRAKP LKDFRTLQTH YKRKHGVKPF  300
MCRKCGKSFA VRGDWRTHEK NCGKLWYCTC GSDFKHKRSL KDHIRSFGKG HFPHPCHKDF  360
EDCDQKETVD MESDDDELRS AGGSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-104	C2H2 family protein