PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418360.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 466aa MW: 51800.3 Da PI: 6.583

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00014	374	396	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_026418360.1 374 FMCRKCGKAFAVRGDWRTHEKNC 396 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSDPYSNFFP GWFNLNNDHQ LQQHYSPTPS SSSYPLPSPN YHYPHHLYAA PSITDNSAIL 60 QYYRHNYDRS ASCLSTPPSS PPLREALPLL SCLGPAGGNG SRHDQDFNDA SCSAMELEDY 120 DSTVYNGNNE MEKKINSRSD DYDNGDDATK FCLFSSNNNV RTSTATSTTM ASSDTKYPLD 180 QTVAFSLHIG LPSSPTTTTT TTADLISRVS SSCFTMSSST SSGNSHEFMN TTKQQQQLGG 240 VTVAATGYPT TATTTTNTNI NTNCISGCRL NKGQYWIPSP SQILIGPTQF SCPVCCKTFN 300 RYNNMQMHMW GHGSQYRKGS ESLRGTQPTA MLRLPCYCCA PGCRNNIDHP RSKPLKDFRT 360 LQTHYKRKHG IKPFMCRKCG KAFAVRGDWR THEKNCGKLW YCICGSDFKH KRSLKDHIKA 420 FGQGHAAYGI DEVICFEEEE DDGEVEAEDD DEPAALSELE QDDPCP

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSDPYSNFFP GWFNLNNDHQ LQQHYSPTPS SSSYPLPSPN YHYPHHLYAA PSITDNSAIL  60
QYYRHNYDRS ASCLSTPPSS PPLREALPLL SCLGPAGGNG SRHDQDFNDA SCSAMELEDY  120
DSTVYNGNNE MEKKINSRSD DYDNGDDATK FCLFSSNNNV RTSTATSTTM ASSDTKYPLD  180
QTVAFSLHIG LPSSPTTTTT TTADLISRVS SSCFTMSSST SSGNSHEFMN TTKQQQQLGG  240
VTVAATGYPT TATTTTNTNI NTNCISGCRL NKGQYWIPSP SQILIGPTQF SCPVCCKTFN  300
RYNNMQMHMW GHGSQYRKGS ESLRGTQPTA MLRLPCYCCA PGCRNNIDHP RSKPLKDFRT  360
LQTHYKRKHG IKPFMCRKCG KAFAVRGDWR THEKNCGKLW YCICGSDFKH KRSLKDHIKA  420
FGQGHAAYGI DEVICFEEEE DDGEVEAEDD DEPAALSELE QDDPCP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-116	C2H2 family protein