PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026418117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 223aa MW: 25870.2 Da PI: 4.1875 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 35.3 | 2.4e-11 | 130 | 208 | 21 | 99 |
NF-YC 21 lPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 +P rik i+k + +i+ ea l+ ka e f+ ++t + + + +++++ ++++vt+t+ +dfl d vp++ XP_026418117.1 130 FPANRIKTIIKNEGFDFRITQEAVFLINKATEQFLEQFTEDARANVIKDRKKAVAYKHVSSVVTKTKRYDFLSDFVPEK 208 899*********999999**********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MKRNPKPKQP IKEPEIQMEA SCSSASEEPM EEEEEQSQSQ SQEEEEQGEE EQVEEEEDGQ 60 EEEEEEEEEE EEEAKSSNNS NENMNEESME DEEEEEQKPE EEVKKIKKKA SSKKIKDTMK 120 PNVVSSACRF PANRIKTIIK NEGFDFRITQ EAVFLINKAT EQFLEQFTED ARANVIKDRK 180 KAVAYKHVSS VVTKTKRYDF LSDFVPEKIK AEDASSERKL AET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 2e-27 | NF-YC family protein |