PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413466.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 361aa    MW: 39326.6 Da    PI: 6.3712
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023244266123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_026413466.1 244 HECSICGAEFSSGQALGGHMRRH 266
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEIQEENMIL NMGSNDISYI AKGKRTKRQR LQSPIILALT NTAPTSSGDD DGGNVENGDD  60
NNNNDNTQII MNNSSVSPTS STTTGFITNN EAEDQEDEDM ANCLILLARG GHGNNDKTSI  120
QHPEEEEDVV IPTVTTATTT TNLMEVAVPR FNSRRITEAS IIGKSGFYVY ECKTCNRCFP  180
SFQALGGHRA SHKKPKNLLM VEDHQQQQLK KSLVLLSEAQ IPVSKATTTT SSSMGFNNNK  240
SKVHECSICG AEFSSGQALG GHMRRHRTSP ITAAATTTNS SAISAIINHN NTTKSTITSI  300
SGTEEFHHPK MQKTRNLLSL DLNLPAPQDD EQQGKFTFGS NSNSKQQSLV FSASPLVDCH  360
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-53C2H2 family protein