PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409999.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 572aa MW: 63504.3 Da PI: 9.8485

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.8	6.6e-25	242	295	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+ Wt +LH++F++a+e+L G +k +Pk+ile m ++gLt+e+v+SHLQkYR+ XP_026409999.1 242 KRRVIWTADLHNHFLDAIEKL-GVDKGVPKRILEYMRIPGLTRENVASHLQKYRI 295 679****************.******************************6 PP
2	Myb_DNA-binding	36.9	8.3e-12	246	294	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ ++da+++lG + +k+I ++m g+t++++ s++qky+ XP_026409999.1 246 IWTADLHNHFLDAIEKLGVDkgVPKRILEYMRiPGLTRENVASHLQKYR 294 5****************99*************************7 PP
3	Response_reg	79.4	1.3e-26	52	156	1	104
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 v++vdD+ + + + +l+k +y ev+ ++ g+eal+llkek +Dl++ D+ mp+m+G++ll++i+++ ++p++++++ + e++++al+ G XP_026409999.1 52 VMVVDDNTACLFITSIMLQKFNY-EVTGVRGGREALKLLKEKPrhFDLVISDLHMPEMNGIQLLRRIKRKYATVPVLLMSGDIKAEMVTRALENG 145 89*******************.***********998888********************************************** PP ESEEEESS--H CS Response_reg 94 akdflsKpfdp 104 a +l Kp+ XP_026409999.1 146 AGYYLYKPVTC 156 ******875 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MDAIDFSCDS DFDDLEDLDV IRKRLSLSLN SAHNSPNTSD HIEDDAPAGL RVMVVDDNTA 60 CLFITSIMLQ KFNYEVTGVR GGREALKLLK EKPRHFDLVI SDLHMPEMNG IQLLRRIKRK 120 YATVPVLLMS GDIKAEMVTR ALENGAGYYL YKPVTCSDFE KLWQHVIKIK VDPKGYEKDM 180 ESFCQDSPRE KQKTTSRVPV SSSSDYNEGN SRAEVSRKRK EPSREHPGDG KRTRARSAAP 240 KKRRVIWTAD LHNHFLDAIE KLGVDKGVPK RILEYMRIPG LTRENVASHL QKYRIFVKKL 300 VENNRYIEPS TVKSLASRAF HSNFATDEPA PMNLPQNFSQ RTPKYSFGSF QSGSGDGNFK 360 GLNTQTHTSH LSASMVAAGF QLGQSSITPM NNNNKGLMAS TQQPRPTTSV AAGNASSFNQ 420 QNIVDIANGN QNTTTIRPSR SILNMSMGGG RSGRGTMQLV HQQNLMRWRN NGQSAGLLNT 480 STGPIYERGN FQRQDNNAYV ANMGTTSTIG SSFVGNSAQP STLNSTNFTG IQIINDNTNS 540 RGTLHIGPMV STPSNDNNVD NMDYSFTNMP TS

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MDAIDFSCDS DFDDLEDLDV IRKRLSLSLN SAHNSPNTSD HIEDDAPAGL RVMVVDDNTA  60
CLFITSIMLQ KFNYEVTGVR GGREALKLLK EKPRHFDLVI SDLHMPEMNG IQLLRRIKRK  120
YATVPVLLMS GDIKAEMVTR ALENGAGYYL YKPVTCSDFE KLWQHVIKIK VDPKGYEKDM  180
ESFCQDSPRE KQKTTSRVPV SSSSDYNEGN SRAEVSRKRK EPSREHPGDG KRTRARSAAP  240
KKRRVIWTAD LHNHFLDAIE KLGVDKGVPK RILEYMRIPG LTRENVASHL QKYRIFVKKL  300
VENNRYIEPS TVKSLASRAF HSNFATDEPA PMNLPQNFSQ RTPKYSFGSF QSGSGDGNFK  360
GLNTQTHTSH LSASMVAAGF QLGQSSITPM NNNNKGLMAS TQQPRPTTSV AAGNASSFNQ  420
QNIVDIANGN QNTTTIRPSR SILNMSMGGG RSGRGTMQLV HQQNLMRWRN NGQSAGLLNT  480
STGPIYERGN FQRQDNNAYV ANMGTTSTIG SSFVGNSAQP STLNSTNFTG IQIINDNTNS  540
RGTLHIGPMV STPSNDNNVD NMDYSFTNMP TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	9e-61	ARR-B family protein