PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409978.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 358aa    MW: 40856.5 Da    PI: 9.5995
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.73.4e-25242295155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k r+ Wt +LH++F++a+e+L G +k +Pk+ile m ++gLt+e+v+SHLQkYR+
  XP_026409978.1 242 KRRVIWTADLHNHFLDAIEKL-GVDKGVPKRILEYMRIPGLTRENVASHLQKYRI 295
                     689******************.********************************6 PP
2Myb_DNA-binding37.84.4e-12246294348
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       WT++++  ++da+++lG +   +k+I ++m   g+t++++ s++qky+
   XP_026409978.1 246 IWTADLHNHFLDAIEKLGVDkgVPKRILEYMRiPGLTRENVASHLQKYR 294
                      5******************99***************************7 PP
3Response_reg80.55.4e-27521571105
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     v++vdD+ + + +   +l+k +y ev+ ++ g+eal+llkek   +Dl++ D+ mp+m+G++ll++i+++  ++p++++++  + e++++al+ G
  XP_026409978.1  52 VMVVDDNTACLFITSIMLQKFNY-EVTGVRGGREALKLLKEKPrhFDLVISDLHMPEMNGIQLLRRIKRKYATVPVLLMSGDIKAEMVTRALENG 145
                     89*********************.***************998888************************************************** PP

                     ESEEEESS--HH CS
    Response_reg  94 akdflsKpfdpe 105
                     a  +l Kp+  +
  XP_026409978.1 146 AGYYLYKPVTCS 157
                     ********8755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDAIDFSCDS DFDDLEDLDV IRKRLSLSLN SAHSSPNTSD HIEDDAPAGL RVMVVDDNTA  60
CLFITSIMLQ KFNYEVTGVR GGREALKLLK EKPRHFDLVI SDLHMPEMNG IQLLRRIKRK  120
YATVPVLLMS GDIKAEMVTR ALENGAGYYL YKPVTCSDFE KLWQHVIKIK VDPKGYEKDM  180
ESFCQDSPRE KQKTTSRVPV SSSSDYNEGN SRAEVSRKRK EPSREHPGDG KRTRARSAAP  240
KKRRVIWTAD LHNHFLDAIE KLGVDKGVPK RILEYMRIPG LTRENVASHL QKYRIFVKKL  300
IENNRYIEPS TVKSLASRAF HSNFATDEPA PMNLPQNFSQ RTPKYSFGSQ HSNPHFTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-62ARR-B family protein