PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409549.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 215aa MW: 25167.6 Da PI: 9.2931

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.2	1.2e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026409549.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 59 8***********************************************96 PP
2	K-box	79.5	8.1e-27	84	176	5	97
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++k+ e++++++l+ e+a L k+ienL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR++Kn+l++e+ie+l++kek+l een+ L +k XP_026409549.1 84 NSKAIEQQNSQQLKYEAAYLAKKIENLEASKRKLMGEGLESCSIDELQTAENQLEKSLLNIRARKNQLYREKIEQLKQKEKQLLEENEVLCEK 176 3344999*********************************************************************************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFSP RGKLYEFSST 60 TSMRKTIERY QKYNKNVQVN YSSNSKAIEQ QNSQQLKYEA AYLAKKIENL EASKRKLMGE 120 GLESCSIDEL QTAENQLEKS LLNIRARKNQ LYREKIEQLK QKEKQLLEEN EVLCEKCGPR 180 QAEQQNQERE ITPYEITPDS HEVETELQIG RPERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11880.1	5e-71	MIKC_MADS family protein