PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026409548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 25263.7 Da PI: 9.287 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.2 | 1.2e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026409548.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 81.4 | 2.1e-27 | 84 | 177 | 4 | 97 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s++k+ ee+++++l+ e+a+L+k+i nL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR+kKn+l++e+ie+l+ kek+l een+ L +k XP_026409548.1 84 SNNKAIEERNSQQLKYEAANLEKKIGNLEASKRKLMGEGLESCSIDELQTTENQLEKSLLSIRAKKNQLYREKIEQLKLKEKQLLEENEVLCEK 177 4455599**********************************************************************************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFSP RGKLYEFSSS 60 SSSMQKTIVR YQKYNKDVQV NYNSNNKAIE ERNSQQLKYE AANLEKKIGN LEASKRKLMG 120 EGLESCSIDE LQTTENQLEK SLLSIRAKKN QLYREKIEQL KLKEKQLLEE NEVLCEKCGP 180 RQWEQQNQQR EITPYETSPD SYEVETELQI GRPERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-68 | MIKC_MADS family protein |