PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405878.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 401aa MW: 45302.7 Da PI: 9.5393

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.8	3.7e-15	58	157	2	72
trihelix 2 WtkqevlaLiearremeerlrrgk.............................lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 Wt +e+l+Li+a++ +++r ++k +++ +W++v +++++ g+ rs++qC++kw+nl ++ykk++e XP_026405878.1 58 WTLHETLVLITAKKMDDKRRTTTKssstttantppllvgptnksssssssgcrSAELRWKWVENYCWKNGCMRSQNQCNDKWDNLLRDYKKVREY 152 ************888888876667788889999999999999999999999**************************************** PP trihelix 68 ekkrt 72 e++ + XP_026405878.1 153 ESRSS 157 99864 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MSEPQNTTSS SSAALVPVHH YHHHHEPQQE TQLIVSPAAL PNPSASSSLI REYRKGNWTL 60 HETLVLITAK KMDDKRRTTT KSSSTTTANT PPLLVGPTNK SSSSSSSGCR SAELRWKWVE 120 NYCWKNGCMR SQNQCNDKWD NLLRDYKKVR EYESRSSFST TTSNSNVHNH QVQVTVQQQQ 180 QHDDHRDGPS SSSKDLIILF YWQMEKHERK ERNLPTNLPF EVFQALNEVV DLQRQSHPKP 240 SQPSNIIVST TCPPTISVAI PPPQALPHPH RFLPPPPLQP PQSLLPPPVE TITTPTTDST 300 ETEGSSERLE TADRKRQRKV RKLGASITRS ASVLTKTLTD CEEMKEKRHQ HKMQLEERKL 360 QIEETKIEVN KQGFNGIITA INNLSGAIQS LVSSNRQNNA S

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MSEPQNTTSS SSAALVPVHH YHHHHEPQQE TQLIVSPAAL PNPSASSSLI REYRKGNWTL  60
HETLVLITAK KMDDKRRTTT KSSSTTTANT PPLLVGPTNK SSSSSSSGCR SAELRWKWVE  120
NYCWKNGCMR SQNQCNDKWD NLLRDYKKVR EYESRSSFST TTSNSNVHNH QVQVTVQQQQ  180
QHDDHRDGPS SSSKDLIILF YWQMEKHERK ERNLPTNLPF EVFQALNEVV DLQRQSHPKP  240
SQPSNIIVST TCPPTISVAI PPPQALPHPH RFLPPPPLQP PQSLLPPPVE TITTPTTDST  300
ETEGSSERLE TADRKRQRKV RKLGASITRS ASVLTKTLTD CEEMKEKRHQ HKMQLEERKL  360
QIEETKIEVN KQGFNGIITA INNLSGAIQS LVSSNRQNNA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	3e-38	Trihelix family protein