PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403444.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 316aa MW: 36281.2 Da PI: 4.6992

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.5e-21	134	194	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le F + + +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_026403444.1 134 RQRWTPTTVQLQILEHIFDQgTGTPSKQKIKEITNELlqhgQISETNVYNWFQNRRARSKR 194 89***************99************************************97 PP
2	Wus_type_Homeobox	100	1.8e-32	133	196	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPt+ Q++iLe+++++G+ tP+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq XP_026403444.1 133 SRQRWTPTTVQLQILEHIFDQGTGTPSKQKIKEITNELLQHGQISETNVYNWFQNRRARSKRKQ 196 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MCERDIYDYI GMMGLVKYFS KSVEEEEGNQ KEEGEEVSEK VMEFENQLNQ QQQQQHQHQQ 60 EQEQQQNGVL YVKVMTDEQM EVLKRQISAY ASITEQLVQM HKSVSSQHDL TGMKLGNLYC 120 DPLMSSTGHK ISSRQRWTPT TVQLQILEHI FDQGTGTPSK QKIKEITNEL LQHGQISETN 180 VYNWFQNRRA RSKRKQLVNT INTAESEAET EDESQMEKKA KPESIQSHEN SALRLEEMCF 240 NSSEMNSDLH LLDPYSNQPE MFPSDGGSKS SGSLGRLSYY ESVMSNPRLD HLMGKVEEIP 300 GSFSTFPQES GYDIIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	196	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-72	WOX family protein