PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403293.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 361aa    MW: 39423.6 Da    PI: 5.7699
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023244266123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_026403293.1 244 HECSICGAEFSSGQALGGHMRRH 266
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEIQEENMIL NMGSNDISYI AKGKRTKRQR LQSPIILALT NTAATSSGDD DDGGNVENGD  60
DNNNNDNTQI IMNNSSVSPT SSTTTGFITN NEAEDQEDED MANCLILLAR GGHGNDKTSI  120
QHPEEDNEEE DVVIPTATTT ANLMEVAVPR FNSRRITEAP IIGKSGFYVY ECKTCNRCFP  180
SFQALGGHRA SHKKPKNLLM VEDHQQQQLK KSLVLLSEAQ IPVSRATTTT SSSMGFNNNK  240
SKVHECSICG AEFSSGQALG GHMRRHRTTP ITAAATTTNS SAISAIINHN NTSKNTITSI  300
SGTEEFYHPK MQKTRNLLSL DLNLPAPQDD EQQSKFTFGS NSNSKQQSLV FSASALVDCH  360
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.13e-54C2H2 family protein