PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397632.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 469aa MW: 52132.5 Da PI: 6.1208

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	292	311	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_026397632.1 292 FSCPVCWKTFNRYNNMQMHM 311 89*****************9 PP
2	zf-C2H2	14	0.00014	376	398	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_026397632.1 376 FMCRKCGKAFAVRGDWRTHEKNC 398 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSDPYSNFFP GWFNLNNDHQ LQQHYSPTPS SSSYPLPPPN YHYPHHLYAA PSITDNSSIL 60 QYYRHNYDRS ASCLSTPPSS PPLREALPLL SCLGPAGGNG SRHDQDFNDA SCSAMELEDY 120 DSTVYNGSNE MEKKISSRSE DYDDGDDATK FCLFSSNNNA TTTTATSTAM ASSDTKYPLD 180 QTVAFSLHIG LPSSPTTTTT TADLISRVSS SCFTMSSSTS SGNSHEFMNT TKQQQQLGGV 240 TVAATGYPTT ATTTTTTTTT NTNTDCISGC RLNKGQYWIP SPSQILIGPT QFSCPVCWKT 300 FNRYNNMQMH MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAPGCRNNID HPRSKPLKDF 360 RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCICGSDF KHKRSLKDHI 420 KAFGQGHAAY GIDEVICFEE EEEDDGEVEA EDDDEPDALS ELEQDDPCP

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSDPYSNFFP GWFNLNNDHQ LQQHYSPTPS SSSYPLPPPN YHYPHHLYAA PSITDNSSIL  60
QYYRHNYDRS ASCLSTPPSS PPLREALPLL SCLGPAGGNG SRHDQDFNDA SCSAMELEDY  120
DSTVYNGSNE MEKKISSRSE DYDDGDDATK FCLFSSNNNA TTTTATSTAM ASSDTKYPLD  180
QTVAFSLHIG LPSSPTTTTT TADLISRVSS SCFTMSSSTS SGNSHEFMNT TKQQQQLGGV  240
TVAATGYPTT ATTTTTTTTT NTNTDCISGC RLNKGQYWIP SPSQILIGPT QFSCPVCWKT  300
FNRYNNMQMH MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAPGCRNNID HPRSKPLKDF  360
RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCICGSDF KHKRSLKDHI  420
KAFGQGHAAY GIDEVICFEE EEEDDGEVEA EDDDEPDALS ELEQDDPCP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-115	C2H2 family protein