PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026397577.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 239aa MW: 27725.2 Da PI: 4.2581 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 31.2 | 4.6e-10 | 143 | 224 | 18 | 99 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 ++P rik i+k + +i+ ea l+ ka e f+ ++ + + + +++++ ++++vt+t+ +dfl d p++ XP_026397577.1 143 ACRFPANRIKTIIKNEGFDFRITQEAVFLINKATEQFLEQFMEDARANVIKDRKKAVAYKHVSSVVTKTKRYDFLSDFAPEK 224 5679***********999999****************999999999999999999**********************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MKRSSSSSRK EEETTMKRNP IPKLPIKEPE IQMEASSSSA SEEPMEEEEE QSQSQSQEEE 60 EQGEEEEEQV EEKEDGQEEE EEEEEEEEEA KSSNNSNENM NEESMEDEEE EEQKPEEEVK 120 KIKKKGSSKK IKDTMKRDVV SSACRFPANR IKTIIKNEGF DFRITQEAVF LINKATEQFL 180 EQFMEDARAN VIKDRKKAVA YKHVSSVVTK TKRYDFLSDF APEKIKAEDA SSERKLAET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 5e-26 | NF-YC family protein |