PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026394305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 252aa MW: 29587.6 Da PI: 9.5507 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.1 | 2.3e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien +nrqvt+skRr gilKKA+EL vLCdaev++i+fsstgk+ ey XP_026394305.1 9 KRIENATNRQVTYSKRRSGILKKAKELTVLCDAEVSLIMFSSTGKMTEYL 58 79**********************************************96 PP | |||||||
2 | K-box | 14.9 | 1.1e-06 | 73 | 108 | 1 | 36 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqR 36 yq+ sg+sl+++++eslq+ l+k k+ ++ L+re+R XP_026394305.1 73 YQQISGSSLWNSHYESLQNALNKQKEINKRLRREIR 108 8999******************************99 PP | |||||||
3 | K-box | 64.9 | 2.8e-22 | 134 | 197 | 36 | 99 |
K-box 36 RhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 R+++GedL++L++ eL++Le +Le s+k +R++K++++++q+e+++kk +++ e+++ L +++e XP_026394305.1 134 RQRMGEDLDELTIDELRNLEANLEASVKVVRDRKYHVIITQTETTRKKLRNHTEQHHGLLREFE 197 9**********************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGRGKIEIKR IENATNRQVT YSKRRSGILK KAKELTVLCD AEVSLIMFSS TGKMTEYLSP 60 SLNGNTKRVY DRYQQISGSS LWNSHYESLQ NALNKQKEIN KRLRREIRYQ EARSIFYVHC 120 IVKKLIIFSF WIYRQRMGED LDELTIDELR NLEANLEASV KVVRDRKYHV IITQTETTRK 180 KLRNHTEQHH GLLREFEPID EDPRFILAGQ EEDYESAIEL ANGQNIFTFR LQPSQPNLHN 240 GGGYHCHDLR LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 4e-56 | MIKC_MADS family protein |