PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026393658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 25844.2 Da PI: 9.482 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.4 | 1.8e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien +nrqvt+skRr gilKKA+EL vLCdaev++i+fsstgk+ ey XP_026393658.1 9 KRIENATNRQVTYSKRRSGILKKAKELTVLCDAEVSLIMFSSTGKMTEYL 58 79**********************************************96 PP | |||||||
2 | K-box | 92.4 | 7.6e-31 | 73 | 171 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yq+ sg+sl++a++eslq+ l+k k+ ++ L+re+R+++GedL++L++ eL++Le +Le s+k +R++K++++++q+e+++kk +++ e+++ L XP_026393658.1 73 YQQISGSSLWNAHYESLQNALNKQKEINRRLRREIRQRMGEDLDELTIDELRNLEANLEASVKVVRDRKYHVIITQTETTRKKLRNHTEQHHGLL 167 8999******************************************************************************************9 PP K-box 96 kkle 99 +++e XP_026393658.1 168 REFE 171 9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGRGKIEIKR IENATNRQVT YSKRRSGILK KAKELTVLCD AEVSLIMFSS TGKMTEYLSP 60 SLNGNTKRVY DRYQQISGSS LWNAHYESLQ NALNKQKEIN RRLRREIRQR MGEDLDELTI 120 DELRNLEANL EASVKVVRDR KYHVIITQTE TTRKKLRNHT EQHHGLLREF EPIDEDPRFI 180 LAVEEEDYES AIELANGQNI FTFRLQPSQP NLHNGGGYLR LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-56 | MIKC_MADS family protein |