PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026385963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 194aa MW: 22229.6 Da PI: 10.6047 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.8 | 1.1e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELS+LC+aeva+++fs++gk + ++s XP_026385963.1 9 KRIENTTSRQVTFSKRRNGLLKKAFELSILCEAEVALVVFSPSGKAFQFAS 59 79*******************************************999985 PP | |||||||
2 | K-box | 77.4 | 3.7e-26 | 81 | 175 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + s+ +++ae +++e++ +kk ++L+ ++h+ GedL L++k+L+qLe+q++++++++Rs+K +ll e+i+ l++k+k+lq+en +L+k+l+e XP_026385963.1 81 SCSQRSRTAEFWRTEIDEMKKLADMLEARNKHICGEDLPLLDMKDLKQLERQIKTGVERVRSRKRRLLAEHINMLKRKQKALQDENACLQKRLNE 175 444678889******************999************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MGRGKVELKR IENTTSRQVT FSKRRNGLLK KAFELSILCE AEVALVVFSP SGKAFQFASH 60 DSIDRTIARY RSVAGLPESS SCSQRSRTAE FWRTEIDEMK KLADMLEARN KHICGEDLPL 120 LDMKDLKQLE RQIKTGVERV RSRKRRLLAE HINMLKRKQK ALQDENACLQ KRLNEINVSS 180 RTSKEGDRCS STTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 4e-49 | MIKC_MADS family protein |