PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382439.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 402aa MW: 46113.7 Da PI: 8.5809

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.7	7.5e-22	89	148	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_026382439.1 89 SRWNPTPEQLRTLEELYKRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 148 7***************99************************************97 PP
2	Wus_type_Homeobox	115.6	2.4e-37	88	150	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leelyk+G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_026382439.1 88 SSRWNPTPEQLRTLEELYKRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 150 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MWMMGCNEGG GGYNTATTTT NFDSFNGRKL RPLIPKPCNT TTNGNLLPTS LSSNPPCLSR 60 LRGSDIILFN NHLEQSKREM NTTTTVVSSR WNPTPEQLRT LEELYKRGTR TPSADQIQHI 120 TAQLRRYGKI EGKNVFYWFQ NHKARERQKR RRRSSDEPAS GSSTITDDNN NNNNKQQHHE 180 TECLFETNES RMSKTCYEVE QTKNWHHPTN CSTLTPEPVS VQGAALVSSA AVESRNTNGW 240 IQLENKELHQ RRNSSSAELQ ATWQQMLQQQ QQHFSSTNSK HHLIDTTPTP SLIRSLSTNP 300 KLTNTTHHHQ QQHQNLSFLF ASSKILMRNN QDHQQSYYNN TTDQDKSQTL ELFPLRKDHV 360 NDSGNTDDYG NGINEKEKAH QDMSATTNNM NTTPPYQFFE FL

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MWMMGCNEGG GGYNTATTTT NFDSFNGRKL RPLIPKPCNT TTNGNLLPTS LSSNPPCLSR  60
LRGSDIILFN NHLEQSKREM NTTTTVVSSR WNPTPEQLRT LEELYKRGTR TPSADQIQHI  120
TAQLRRYGKI EGKNVFYWFQ NHKARERQKR RRRSSDEPAS GSSTITDDNN NNNNKQQHHE  180
TECLFETNES RMSKTCYEVE QTKNWHHPTN CSTLTPEPVS VQGAALVSSA AVESRNTNGW  240
IQLENKELHQ RRNSSSAELQ ATWQQMLQQQ QQHFSSTNSK HHLIDTTPTP SLIRSLSTNP  300
KLTNTTHHHQ QQHQNLSFLF ASSKILMRNN QDHQQSYYNN TTDQDKSQTL ELFPLRKDHV  360
NDSGNTDDYG NGINEKEKAH QDMSATTNNM NTTPPYQFFE FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-35	WOX family protein