PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026380238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 193aa MW: 22658.5 Da PI: 6.5469 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 52.7 | 5.3e-17 | 1 | 32 | 20 | 51 |
HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51 +lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026380238.1 1 MLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 32 59****************************96 PP | |||||||
2 | K-box | 82.9 | 7.1e-28 | 57 | 150 | 4 | 97 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s++k+ ee+++++l+ e+a+L+k+ienL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR+kKn+l++e+ie+l++kek+l een+ L +k XP_026380238.1 57 SNNKAIEERNSQQLKYEAANLEKKIENLEASKRKLMGEGLESCSIDELQTTENQLEKSLLSIRAKKNQLYREKIEQLKQKEKQLLEENEVLCQK 150 3344499***********************************************************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MLKKAFELSV LCEAEVALIV FSPRGKLYEF SSSSSSMQKT IDRYQKYNKD VQVNYSSNNK 60 AIEERNSQQL KYEAANLEKK IENLEASKRK LMGEGLESCS IDELQTTENQ LEKSLLSIRA 120 KKNQLYREKI EQLKQKEKQL LEENEVLCQK CGPRQWEQQN QQNHQQREII PYETSPDSHE 180 VETELQIGRP ERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 9e-49 | MIKC_MADS family protein |