PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380237.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24993.5 Da    PI: 9.7854
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.21.2e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gklye+ss
  XP_026380237.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 59
                    8***********************************************96 PP
2K-box80.25.1e-2784176597
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     ++k+ e++++++l+ e+a+L k+ienL+ ++R+l+Ge+Les+s+ eLq  e+qLeksl +iR++Kn+l++e+ie+l++kek+l een  L +k
  XP_026380237.1  84 NSKAIEQQNSQQLKYEAANLAKKIENLEASKRKLMGEGLESCSIDELQTAENQLEKSLLNIRARKNQLYREKIEQLKQKEKQLLEENGVLCEK 176
                     3344999********************************************************************************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFSP RGKLYEFSSA  60
TSMRKTIERY QKYNKNVQVN YSSNSKAIEQ QNSQQLKYEA ANLAKKIENL EASKRKLMGE  120
GLESCSIDEL QTAENQLEKS LLNIRARKNQ LYREKIEQLK QKEKQLLEEN GVLCEKCGPR  180
QGEPQHQKRE ITPYEITPDS HEVETELQIG RPERR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.19e-72MIKC_MADS family protein