PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379417.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 720aa MW: 79293.2 Da PI: 6.3173

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.6	7.6e-25	201	254	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+ Wt eLH++F++a+e+L G +k +Pk+ile m ++gLt+e+v+SHLQkYR+ XP_026379417.1 201 KRRVIWTAELHNHFLDAIEKL-GVDKGVPKRILEYMRIPGLTRENVASHLQKYRI 254 679****************.******************************6 PP
2	Myb_DNA-binding	38.3	3e-12	205	253	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++da+++lG + +k+I ++m g+t++++ s++qky+ XP_026379417.1 205 IWTAELHNHFLDAIEKLGVDkgVPKRILEYMRiPGLTRENVASHLQKYR 253 5****************99*************************7 PP
3	Response_reg	77.1	6.1e-26	12	115	2	104
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 ++vdD+ + + + +l+k +y ev+ ++ g+eal+llkek +Dl++ D+ mp+m+G++ll++i+++ ++p++++++ + e++++al+ Ga XP_026379417.1 12 MVVDDNTACLFITSIMLQKFNY-EVTGVRGGREALKLLKEKPrhFDLVISDLHMPEMNGIQLLRRIKRKYATVPVLLMSGDIKAEMVTRALENGA 105 89******************.***********998888*********************************************** PP SEEEESS--H CS Response_reg 95 kdflsKpfdp 104 +l Kp+ XP_026379417.1 106 GYYLYKPVTC 115 *****875 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MEDDAPAGLR AMVVDDNTAC LFITSIMLQK FNYEVTGVRG GREALKLLKE KPRHFDLVIS 60 DLHMPEMNGI QLLRRIKRKY ATVPVLLMSG DIKAEMVTRA LENGAGYYLY KPVTCSDFEK 120 LWQHVIKSKV DPKGCEKDME SFCQDSPREK QKSTSRVPVS SSSDYNEGNS RTEVSRKRNE 180 PSREQPGDGK RTRARSAAPK KRRVIWTAEL HNHFLDAIEK LGVDKGVPKR ILEYMRIPGL 240 TRENVASHLQ KYRIFVKKLV ENNRYIEPST VKSLASRAFH SNFATDEPAP MNLPQNFSQR 300 TPKYSFGSFQ SGSGDGNFKG LNTQTHSSHL SASMVVAGFQ LGQSSITPMN NNNKGLMAST 360 QQPRSTTSVA AGNASSFNHQ NIVDIANGNQ NTTTIRPSRS ILNMSMGGGR SGRGTMQLVH 420 QQNLMRWRNN GQSAGLLNTS TGTIYERGNF QRQNNNAYVA NMGTTSTIDS SFVGNSAQPS 480 TLNSTNFTGI QIINDNTNSR GTLHIGPMVS TPSNDNNVDN MDYSFTNMPT SLVTEVPGLV 540 HESPAIQSSY SVIEEPNSDP DYLNSEPSSV APVEVSNPTP QPPCMNTNGF TVPQDEASFR 600 GGIIPNANHQ SISPQEETQV PTVPVAPAPL VQEAQQPEQA GTDEEDPFEG LYDLLRNDSN 660 IGSSLPPLMD NEDFAHYFQD FEQSNIHQGE IYGGKDFLNP DFDTSACEVT NGGNDGISQL

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MEDDAPAGLR AMVVDDNTAC LFITSIMLQK FNYEVTGVRG GREALKLLKE KPRHFDLVIS  60
DLHMPEMNGI QLLRRIKRKY ATVPVLLMSG DIKAEMVTRA LENGAGYYLY KPVTCSDFEK  120
LWQHVIKSKV DPKGCEKDME SFCQDSPREK QKSTSRVPVS SSSDYNEGNS RTEVSRKRNE  180
PSREQPGDGK RTRARSAAPK KRRVIWTAEL HNHFLDAIEK LGVDKGVPKR ILEYMRIPGL  240
TRENVASHLQ KYRIFVKKLV ENNRYIEPST VKSLASRAFH SNFATDEPAP MNLPQNFSQR  300
TPKYSFGSFQ SGSGDGNFKG LNTQTHSSHL SASMVVAGFQ LGQSSITPMN NNNKGLMAST  360
QQPRSTTSVA AGNASSFNHQ NIVDIANGNQ NTTTIRPSRS ILNMSMGGGR SGRGTMQLVH  420
QQNLMRWRNN GQSAGLLNTS TGTIYERGNF QRQNNNAYVA NMGTTSTIDS SFVGNSAQPS  480
TLNSTNFTGI QIINDNTNSR GTLHIGPMVS TPSNDNNVDN MDYSFTNMPT SLVTEVPGLV  540
HESPAIQSSY SVIEEPNSDP DYLNSEPSSV APVEVSNPTP QPPCMNTNGF TVPQDEASFR  600
GGIIPNANHQ SISPQEETQV PTVPVAPAPL VQEAQQPEQA GTDEEDPFEG LYDLLRNDSN  660
IGSSLPPLMD NEDFAHYFQD FEQSNIHQGE IYGGKDFLNP DFDTSACEVT NGGNDGISQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	6e-59	ARR-B family protein