PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026378138.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 410aa MW: 46810.4 Da PI: 7.9714

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026378138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.3	9.6e-22	91	150	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_026378138.1 91 SRWNPTPEQLSTLEELYKRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 150 7***************99************************************97 PP
2	Wus_type_Homeobox	115.3	3e-37	90	152	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+ Leelyk+G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_026378138.1 90 SSRWNPTPEQLSTLEELYKRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 152 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MWMMGCNEGG GGGGYNTATT TTNFDSFNGR KLRPLIPKPC NTTTNGNLLP TSLSSNPPCL 60 SRLRGSDIIL FNNHLEQSKR EMNTTTTVVS SRWNPTPEQL STLEELYKRG TRTPSADQIQ 120 HITAQLRRYG KIEGKNVFYW FQNHKARERQ KRRRRSSDEP ASGSSTITDD NNNNNNNNKQ 180 QHHETECLFE TNESRMSKTC YEVEQTKNWH HPTNCSTLTQ EPVSVQGAAL VSSAAVESRN 240 TNGWIQLEDK ELHQRRNSSG SAELQATWHL QQMLQQQQQH FSSTNSKHHL IDTTTTPSLI 300 RSLSTDPKLT NTTHHHHQQH QNLSFLFASN KILMRNNQDH QQSYYNSTND IQDKSQTLEL 360 FPLRKDHVND SGDTGDYGDG INEKEKAHQD MSASTKNMNT TPPYQFFEFL

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MWMMGCNEGG GGGGYNTATT TTNFDSFNGR KLRPLIPKPC NTTTNGNLLP TSLSSNPPCL  60
SRLRGSDIIL FNNHLEQSKR EMNTTTTVVS SRWNPTPEQL STLEELYKRG TRTPSADQIQ  120
HITAQLRRYG KIEGKNVFYW FQNHKARERQ KRRRRSSDEP ASGSSTITDD NNNNNNNNKQ  180
QHHETECLFE TNESRMSKTC YEVEQTKNWH HPTNCSTLTQ EPVSVQGAAL VSSAAVESRN  240
TNGWIQLEDK ELHQRRNSSG SAELQATWHL QQMLQQQQQH FSSTNSKHHL IDTTTTPSLI  300
RSLSTDPKLT NTTHHHHQQH QNLSFLFASN KILMRNNQDH QQSYYNSTND IQDKSQTLEL  360
FPLRKDHVND SGDTGDYGDG INEKEKAHQD MSASTKNMNT TPPYQFFEFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-35	WOX family protein