PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044670.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 222aa    MW: 25456.1 Da    PI: 9.1211
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044670.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.6e-32143201159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK vk ++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+
  PCP044670.1 143 LDDGYRWRKYGQKAVKANKFPRSYYRCTYEGCNVKKQVQRLSKDEGVVVTTYEGMHTHP 201
                  59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEKYQMFFPC SSSANYPNPN STNTDHHHRV GSSHVYTNNF DGRVDQTSDA FLGLKSTMTT  60
ENHVGSSSDE VLVHKDGHPY QQYYQQHYPS ANAGMSNVIV GADQSSVDPH RANNNDSEKK  120
KKGEKKMKKP KYAFQTRSQV DILDDGYRWR KYGQKAVKAN KFPRSYYRCT YEGCNVKKQV  180
QRLSKDEGVV VTTYEGMHTH PIDKPSDNFE HILNQMQIYT PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.12e-54WRKY family protein