PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044449.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 375aa MW: 42338.4 Da PI: 4.647

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044449.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.8	1.4e-32	29	129	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed++++ ++sw++ nsfvv+d+++f++++L++yFkhsnf+SF+RQLn+Y ++++ ++ +k +++ weF++k F g+++ll++ik PCP044449.1 29 FLTKTFEMVEDPSTDAIVSWTRARNSFVVWDSHKFSTTLLTRYFKHSNFSSFIRQLNTYACSSTECMQGFKKVDSDRWEFANKGFLGGQRHLLKTIK 125 9****************************************************************9998889********************* PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PCP044449.1 126 RRRH 129 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MDGVVVKEEE TSFPPQPVEG LHEVGPPPFL TKTFEMVEDP STDAIVSWTR ARNSFVVWDS 60 HKFSTTLLTR YFKHSNFSSF IRQLNTYACS STECMQGFKK VDSDRWEFAN KGFLGGQRHL 120 LKTIKRRRHV SQSMQQEAGG GDCVELGQYG VETELERLKR DRNVLMTELV KLRQQQHNSR 180 EQVMVMEGRL LATEKKQQQM TNFLAKALNS PSFLQHLVEK NAKNRKLHGI EIGRKRRLAA 240 SPSLENLQEA PIIDVEDYSA NQDQGELANM EPDIENFLST AALDNKSSSG IKDPNPSLVP 300 TSTTGGHLDS VSETIWEELW SDELIGGNPE EEVVVVGDES EIDVEVDDLV AEPADWSKDL 360 QDLLDEMGYQ TQPKP

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MDGVVVKEEE TSFPPQPVEG LHEVGPPPFL TKTFEMVEDP STDAIVSWTR ARNSFVVWDS  60
HKFSTTLLTR YFKHSNFSSF IRQLNTYACS STECMQGFKK VDSDRWEFAN KGFLGGQRHL  120
LKTIKRRRHV SQSMQQEAGG GDCVELGQYG VETELERLKR DRNVLMTELV KLRQQQHNSR  180
EQVMVMEGRL LATEKKQQQM TNFLAKALNS PSFLQHLVEK NAKNRKLHGI EIGRKRRLAA  240
SPSLENLQEA PIIDVEDYSA NQDQGELANM EPDIENFLST AALDNKSSSG IKDPNPSLVP  300
TSTTGGHLDS VSETIWEELW SDELIGGNPE EEVVVVGDES EIDVEVDDLV AEPADWSKDL  360
QDLLDEMGYQ TQPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-114	HSF family protein