PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043252.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 150aa    MW: 17102.3 Da    PI: 10.0109
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043252.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.32.8e-3268126159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vk+++fprsYY+Ct++gC+vkk+v+r ++d+ +v++tY g H+h+
  PCP043252.1  68 LDDGYRWRKYGQKVVKNNKFPRSYYKCTHQGCMVKKQVQRLSKDEGIVVTTYDGIHTHR 126
                  59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MDHNSQIFFL GSSASSSASP IFSSSQSSFP LCLGDRNAGM MKSGRKEGDK VNKKQKYAFQ  60
TRSQVDILDD GYRWRKYGQK VVKNNKFPRS YYKCTHQGCM VKKQVQRLSK DEGIVVTTYD  120
GIHTHRIDEY SAENLEQIIR HIQASTVPNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-44WRKY family protein